Showing : Alternative splicing • reset
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Psichomics Suppa Input issue
psichomics SUPPA Splicing Alternative Splicing Retained Introns
3.6 years ago noahhelton98 ▴ 20
3
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3
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890
views
Custom gene annotations for SGSeq
sgseq alternative splicing rna seq
updated 4.5 years ago by ▴ 200 • written 4.5 years ago by • 0
0
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2
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783
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using only uniquely-mapping reads for alternative splicing using SGSeq
rna seq SGSeq Alternative splicing
updated 4.6 years ago by ▴ 200 • written 4.6 years ago by • 0
3
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2
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1.0k
views
ASpli readCounts never ends!
aspli readCounts rna-seq alternative splicing AS
5.3 years ago fernandalpcosta ▴ 10
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0
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899
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ASpli AsDiscover error
R alternative splicing ASpli AsDiscover
5.4 years ago abdul rawoof ▴ 60
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951
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ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq alternative splicing ASpli
5.5 years ago nicolas.guyon2 • 0
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6
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1.5k
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Which sequencing parameters are required for SGSeq analysis of splice events?
rna-seq alternative splicing SGSeq
5.5 years ago andrea.bast • 0
0
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2
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1.2k
views
Getting error in running maser 0.99.16
maser R rMATs alternative splicing
5.7 years ago Reza • 0
0
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3
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1.3k
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differential splicing events and covariates
limma rna-seq alternative splicing
updated 6.6 years ago by 50k • written 6.6 years ago by ▴ 80
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0
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1.2k
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visualizing top differentially spliced genes
limma voom alternative splicing
8.2 years ago osa.zuta ▴ 40
5
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16
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2.7k
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Read counts generated by SGSeq are always 0
sgseq splicing alternative splicing
updated 8.2 years ago by ▴ 200 • written 8.2 years ago by ▴ 20
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1
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1.1k
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estimateDispersions fails even with fitType local
deseq2 dexseq alternative splicing
updated 8.5 years ago by 42k • written 8.5 years ago by • 0
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5
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2.2k
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DEXSeq - Error in estimateSizeFactorsForMatrix(featureCounts(object)
DEXSeq DESeq2 dexseq deseq2 alternative splicing
8.6 years ago Fahmi Nazarie • 0
0
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1
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1.9k
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DEXSeq with multiple conditions
dexseq alternative splicing exon skipping
updated 9.2 years ago by ★ 3.7k • written 9.2 years ago by • 0
14 results • Page 1 of 1
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Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0
I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…
Answer: SingleR Label.Ont by Denis • 0
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Comment: deseq2 results by sajadahmad41454 • 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
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